Tool recommendations?

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That's weird. I couldn't spot anything in the LZ-compressed chunks, either (though I don't know if that program I use finds them all etc.).

However, you can still rip them using VBA. There's cheats for all items (or I could send you a savestate or save file), so you'd just have to go through the item lists. I'd suggest using the map viewer (BG3) as it would get you the items with their correct palettes, plus you'd save four items at once - then you'd just need to cut them out (I suggest IrfanView to do that batch-automated) and rearrange them on a sheet.

Cheat:

9368AC158812
2DD1AE2BF81E
91CF78E62CC0
DA8EF3992FE3
D0DDF9EB0D6E
9A4EFBBB044B
F0DDF9EF0D7C
(GameShark, works with the european version of the game)